Understanding the Adult Mammalian Heart at Single-Cell RNA-Seq Resolution.
de Morentin, Xabier Martínez
Pérez-Pomares, Jose M
KAUST DepartmentBiological and Environmental Science and Engineering (BESE) Division
Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.
Permanent link to this recordhttp://hdl.handle.net/10754/669345
MetadataShow full item record
AbstractDuring the last decade, extensive efforts have been made to comprehend cardiac cell genetic and functional diversity. Such knowledge allows for the definition of the cardiac cellular interactome as a reasonable strategy to increase our understanding of the normal and pathologic heart. Previous experimental approaches including cell lineage tracing, flow cytometry, and bulk RNA-Seq have often tackled the analysis of cardiac cell diversity as based on the assumption that cell types can be identified by the expression of a single gene. More recently, however, the emergence of single-cell RNA-Seq technology has led us to explore the diversity of individual cells, enabling the cardiovascular research community to redefine cardiac cell subpopulations and identify relevant ones, and even novel cell types, through their cell-specific transcriptomic signatures in an unbiased manner. These findings are changing our understanding of cell composition and in consequence the identification of potential therapeutic targets for different cardiac diseases. In this review, we provide an overview of the continuously changing cardiac cellular landscape, traveling from the pre-single-cell RNA-Seq times to the single cell-RNA-Seq revolution, and discuss the utilities and limitations of this technology.
CitationMarín-Sedeño, E., de Morentin, X. M., Pérez-Pomares, J. M., Gómez-Cabrero, D., & Ruiz-Villalba, A. (2021). Understanding the Adult Mammalian Heart at Single-Cell RNA-Seq Resolution. Frontiers in Cell and Developmental Biology, 9. doi:10.3389/fcell.2021.645276
SponsorsThis work was supported by funds from the Spanish Ministry of Science, Innovation and Universities (RTI2018-095410-BI00); University of Málaga (UMA18-FEDERJA-146), and Carlos III Institute of Health (RD16/0011/0030). EM-S was supported by funds from the Spanish Ministry of Science, Innovation and Universities FPU fellowship (FPU18/05219). AR-V was supported by funds from University of Málaga (Incorporación de doctores from the I Plan Propio de Incorporación de Doctores, 2020).
PublisherFrontiers Media SA
Except where otherwise noted, this item's license is described as This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.