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    Fish10K Pilot Project Data

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    Type
    Dataset
    Authors
    Fan, Guangyi
    Song, Yue
    Yang, Liandong
    Huang, Xiaoyun
    Zhang, Suyu
    Zhang, Mengqi
    Yang, Xianwei
    Chang, Yue
    Zhang, He
    Li, Yongxin
    Liu, Shanshan
    Yu, Lili
    Chu, Jeffery
    Seim, Inge
    Feng, Chenguang
    Near, Thomas J
    Wing, Rod Anthony cc
    Wang, Wen
    Wang, Kun
    Wang, Jing
    Xu, Xun
    Yang, Huanming
    Liu, Xin
    Chen, Nansheng
    He, Shunping
    KAUST Department
    Plant Science
    Biological and Environmental Sciences and Engineering (BESE) Division
    Date
    2020
    Permanent link to this record
    http://hdl.handle.net/10754/664974
    
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    Abstract
    With more than 30,000 species, fish are the largest and most ancient vertebrate group. Despite their critical roles in many ecosystems and human society, fish genomics lags behind work on birds and mammals. This severely limits our understanding of evolution and hinders progress on the conservation and sustainable use of fish. Here, we announce the Fish10K project, an international collaborative effort aiming to sequence 10,000 representative fish genomes in a systematic manner within ten years, and officially welcome collaborators to join this effort. As a step towards this goal, we herein describe the best practices for the procurement and storage of biospecimens, sequencing, and assembly strategies. To illustrate, we present the genomes of ten fish species from a cohort of 105 species chosen for technology development.
    Citation
    Guangyi, F., Yue, S., Liandong, Y., Xiaoyun, H., Suyu, Z., Mengqi, Z., Xianwei, Y., Yue, C., He, Z., Yongxin, L., Shanshan, L., Lili, Y., Jeffery, C., Inge, S., Chenguang, F., Thomas, N. J., Rod, W. A., Wen, W., Kun, W., … Shunping, H. (2020). Fish10K Pilot Project Data [Data set]. GigaScience Database. https://doi.org/10.5524/100661
    Publisher
    GigaScience Database
    DOI
    10.5524/100661
    Relations
    Is Supplement To:
    • [Article]
      Fan, G., Song, Y., Yang, L., Huang, X., Zhang, S., Zhang, M., … He, S. (2020). Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K). GigaScience, 9(8). doi:10.1093/gigascience/giaa080. DOI: 10.1093/gigascience/giaa080 HANDLE: 10754/664661
    ae974a485f413a2113503eed53cd6c53
    10.5524/100661
    Scopus Count
    Collections
    Biological and Environmental Sciences and Engineering (BESE) Division; Datasets

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