Genomic Blueprint of Glycine Betaine Metabolism in Coral Metaorganisms and Their Contribution to Reef Nitrogen Budgets
Type
ArticleKAUST Department
Biological and Environmental Sciences and Engineering (BESE) DivisionMarine Science Program
Red Sea Research Center (RSRC)
Reef Genomics Lab
Date
2020-04-30Online Publication Date
2020-04-30Print Publication Date
2020-05Submitted Date
2019-09-11Permanent link to this record
http://hdl.handle.net/10754/662927
Metadata
Show full item recordAbstract
The osmolyte glycine betaine (GB) ranks among the few widespread biomolecules in all three domains of life. In corals, tissue concentrations of GB are substantially higher than in the ambient seawater. However, the synthetic routes remain unresolved, questioning whether intracellular GB originates from de novo synthesis or heterotrophic input. Here we show that the genomic blueprint of coral metaorganisms encode the biosynthetic and degradation machinery for GB. Member organisms also adopted the prokaryotic high-affinity carrier-mediated uptake of exogenous GB, rendering coral reefs potential sinks of marine dissolved GB. The machinery metabolizing GB is highly expressed in the coral model Aiptasia and its microalgal symbionts, signifying GB's role in the cnidarian-dinoflagellate symbiosis. We estimate that corals store between 106–109 grams of GB globally, representing about 16% of their nitrogen biomass. Our findings provide a framework for further mechanistic studies addressing GB's role in coral biology and reef ecosystem nitrogen cycling.Citation
Ngugi, D. K., Ziegler, M., Duarte, C. M., & Voolstra, C. R. (2020). Genomic Blueprint of Glycine Betaine Metabolism in Coral Metaorganisms and Their Contribution to Reef Nitrogen Budgets. iScience, 23(5), 101120. doi:10.1016/j.isci.2020.101120Sponsors
We thank Dorothee Huchon (Tel Aviv University) for kindly availing the myxosporian genomes and transcriptomes and Eric Pelletier (Genoscope) for assistance with the eukaryotic gene catalog data. Additionally, we are grateful to Craig Michell for assistance with metagenomic library construction and the technical personnel at KAUST's Bioscience Core Lab for sequencing. Furthermore, we thank the Coastal & Marine Resources core laboratory team for their help in undertaking the sampling and members of the Thurber lab (Rebecca Vega Thurber, Jerome Payet, and Ryan McMinds) at Oregon State University for sampling assistance. The metagenomic sequencing project was funded through the KAUST SEED funding scheme to C.R. Voolstra. D.K.N. conceived and designed the study and performed the bioinformatic analyses. M.Z. and C.R.V. determined and provided the metagenomic data. C.M.D. provided the bioinformatic resources for the analyses. D.K.N. wrote the manuscript with contributions from all authors. The authors declare no competing interests.Publisher
Elsevier BVJournal
iSciencePubMed ID
32438323PubMed Central ID
PMC7240134Additional Links
https://linkinghub.elsevier.com/retrieve/pii/S2589004220303059https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7240134
Relations
Is Supplemented By:- [Bioproject]
Title: Red Sea coral metagenomesPublication Date: 2018-03-07. bioproject: PRJNA437202 Handle: 10754/666713
ae974a485f413a2113503eed53cd6c53
10.1016/j.isci.2020.101120
Scopus Count
Except where otherwise noted, this item's license is described as This is an open access article under the CC BY-NC-ND license.
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