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dc.contributor.authorGupta, Bidya Bhushan
dc.contributor.authorSelter, Liselotte L
dc.contributor.authorBaranwal, Vinay K
dc.contributor.authorArora, Deepanksha
dc.contributor.authorMishra, Sumit Kumar
dc.contributor.authorSirohi, Parul
dc.contributor.authorPoonia, Anuj K
dc.contributor.authorChaudhary, Reeku
dc.contributor.authorKumar, Rahul
dc.contributor.authorKrattinger, Simon G.
dc.contributor.authorChauhan, Harsh
dc.date.accessioned2019-08-20T06:51:30Z
dc.date.available2019-08-20T06:51:30Z
dc.date.issued2019-08-09
dc.identifier.citationGupta, B. B., Selter, L. L., Baranwal, V. K., Arora, D., Mishra, S. K., Sirohi, P., … Chauhan, H. (2019). Updated inventory, evolutionary and expression analyses of G (PDR) type ABC transporter genes of rice. Plant Physiology and Biochemistry, 142, 429–439. doi:10.1016/j.plaphy.2019.08.004
dc.identifier.doi10.1016/j.plaphy.2019.08.004
dc.identifier.urihttp://hdl.handle.net/10754/656540
dc.description.abstractABC transporters constitute the largest family of transporter proteins in living organisms and divided into eight subfamilies, from A-H. ABCG members, specific to plants and fungi, belong to subfamily G. In this study, we provide updated inventory, detailed account of phylogeny, gene structure characteristics, and expression profiling during reproductive development, abiotic and biotic stresses of members of ABCG gene family in rice along with reannotation and cloning of FL-cDNA of OsABCG50/PDR23. We observed that of the 22 ABCGs/PDRs, four genes evolved as a result of gene duplication events and their expression pattern changed after duplication. Analysis of expression revealed seed and developmental stage preferential expression of five ABCG/PDR members. Transcript levels of eight ABCGs/PDRs were affected by abiotic and biotic stresses. Expression of seven ABCG/PDR genes was also altered by hormonal elicitors. The modulated expression is nicely correlated with the presence of tissue/stress specific cis-acting elements present in putative promoter region.
dc.description.sponsorshipThis study is partly supported by faculty initiation grant from IIT Roorkee. BBG and RC are thankful to CSIR and UGC respectively for fellowship. SKM and PS thank MHRD for fellowship.
dc.publisherElsevier BV
dc.relation.urlhttps://linkinghub.elsevier.com/retrieve/pii/S0981942819303109
dc.rightsNOTICE: this is the author’s version of a work that was accepted for publication in Plant physiology and biochemistry : PPB. Changes resulting from the publishing process, such as peer review, editing, corrections, structural formatting, and other quality control mechanisms may not be reflected in this document. Changes may have been made to this work since it was submitted for publication. A definitive version was subsequently published in Plant physiology and biochemistry : PPB, [[Volume], [Issue], (2019-08-17)] DOI: 10.1016/j.plaphy.2019.08.004 . © 2019. This manuscript version is made available under the CC-BY-NC-ND 4.0 license http://creativecommons.org/licenses/by-nc-nd/4.0/
dc.subjectABCG transporters
dc.subjectAbiotic stress
dc.subjectBiotic stress
dc.subjectExpression analysis
dc.titleUpdated inventory, evolutionary and expression analyses of G (PDR) type ABC transporter genes of rice.
dc.typeArticle
dc.contributor.departmentBiological and Environmental Sciences and Engineering (BESE) Division
dc.contributor.departmentPlant Science
dc.identifier.journalPlant physiology and biochemistry : PPB
dc.rights.embargodate2021-08-17
dc.eprint.versionPost-print
dc.contributor.institutionIndian Institute of Technology Roorkee, India.
dc.contributor.institutionDepartment of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.
dc.contributor.institutionSwami Devanand Post Graduate College, Math-Lar, Deoria, U. P, India.
dc.contributor.institutionVIB Department of Plant Systems Biology, Ghent University, Belgium.
dc.contributor.institutionSchool of Life Sciences, University of Hyderabad, India
kaust.personKrattinger, Simon G.
refterms.dateFOA2019-08-20T12:48:46Z
dc.date.published-online2019-08-09
dc.date.published-print2019-09


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