Community-Level Responses to Iron Availability in Open Ocean Plankton Ecosystems
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Type
ArticleAuthors
Caputi, LuigiCarradec, Quentin
Eveillard, Damien
Kirilovsky, Amos
Pelletier, Eric
Pierella Karlusich, Juan J.
Rocha Jimenez Vieira, Fabio
Villar, Emilie
Chaffron, Samuel
Malviya, Shruti
Scalco, Eleonora
Acinas, Silvia G.
Alberti, Adriana
Aury, Jean Marc
Benoiston, Anne Sophie
Bertrand, Alexis
Biard, Tristan
Bittner, Lucie
Boccara, Martine
Brum, Jennifer R.
Brunet, Christophe
Busseni, Greta
Carratalà, Anna
Claustre, Hervé
Coelho, Luis Pedro
Colin, Sébastien
D'Aniello, Salvatore
Da Silva, Corinne
Del Core, Marianna
Doré, Hugo
Gasparini, Stéphane
Kokoszka, Florian
Jamet, Jean Louis
Lejeusne, Christophe
Lepoivre, Cyrille
Lescot, Magali
Lima-Mendez, Gipsi
Lombard, Fabien
Lukeš, Julius
Maillet, Nicolas
Madoui, Mohammed Amin
Martinez, Elodie
Mazzocchi, Maria Grazia
Néou, Mario B.
Paz-Yepes, Javier
Poulain, Julie
Ramondenc, Simon
Romagnan, Jean Baptiste
Roux, Simon
Salvagio Manta, Daniela
Sanges, Remo
Speich, Sabrina
Sprovieri, Mario
Sunagawa, Shinichi
Taillandier, Vincent
Tanaka, Atsuko
Tirichine, Leila
Trottier, Camille
Uitz, Julia
Veluchamy, Alaguraj
Veselá, Jana
Vincent, Flora
Yau, Sheree
Kandels-Lewis, Stefanie
Searson, Sarah
Dimier, Céline
Picheral, Marc
Bork, Peer
Boss, Emmanuel
de Vargas, Colomban
Follows, Michael J.
Grimsley, Nigel
Guidi, Lionel
Hingamp, Pascal
Karsenti, Eric
Sordino, Paolo
Stemmann, Lars
Sullivan, Matthew B.
Tagliabue, Alessandro
Zingone, Adriana
Garczarek, Laurence
d'Ortenzio, Fabrizio
Testor, Pierre
Not, Fabrice
d'Alcalà, Maurizio Ribera
Wincker, Patrick
Bowler, Chris
Iudicone, Daniele
Date
2019-03-20Online Publication Date
2019-03-20Print Publication Date
2019-03Permanent link to this record
http://hdl.handle.net/10754/656196
Metadata
Show full item recordAbstract
Predicting responses of plankton to variations in essential nutrients is hampered by limited in situ measurements, a poor understanding of community composition, and the lack of reference gene catalogs for key taxa. Iron is a key driver of plankton dynamics and, therefore, of global biogeochemical cycles and climate. To assess the impact of iron availability on plankton communities, we explored the comprehensive bio-oceanographic and bio-omics data sets from Tara Oceans in the context of the iron products from two state-of-the-art global scale biogeochemical models. We obtained novel information about adaptation and acclimation toward iron in a range of phytoplankton, including picocyanobacteria and diatoms, and identified whole subcommunities covarying with iron. Many of the observed global patterns were recapitulated in the Marquesas archipelago, where frequent plankton blooms are believed to be caused by natural iron fertilization, although they are not captured in large-scale biogeochemical models. This work provides a proof of concept that integrative analyses, spanning from genes to ecosystems and viruses to zooplankton, can disentangle the complexity of plankton communities and can lead to more accurate formulations of resource bioavailability in biogeochemical models, thus improving our understanding of plankton resilience in a changing environment.Citation
Caputi, L., Carradec, Q., Eveillard, D., Kirilovsky, A., Pelletier, E., Pierella Karlusich, J. J., … Malviya, S. (2019). Community-Level Responses to Iron Availability in Open Ocean Plankton Ecosystems. Global Biogeochemical Cycles, 33(3), 391–419. doi:10.1029/2018gb006022Sponsors
The Tara Oceans consortium acknowledges the origin of samples from Stations TARA_113-125 as French Polynesia and that they were collected under Convention number 3534 (Convention relatif à la campagne de prélévements et de mésures de Tara Oceans en Polynesie Francaise) dated 16 June 2011. We thank the commitment of the following people and sponsors who made this singular expedition possible: CNRS (in particular Groupement de Recherche GDR3280, the Mission Pour l'Interdisciplinarité – Project MEGALODOM, and the Fédération de Recherche GO-SEE FR2022), European Molecular Biology Laboratory (EMBL), Genoscope/CEA, the French Government “Investissements d'Avenir” programs Oceanomics (ANR-11-BTBR-0008), MEMO LIFE (ANR-10-LABX-54), PSL* Research University (ANR-11-IDEX-0001-02), and FRANCE GENOMIQUE (ANR-10-INBS-09), Fund for Scientific Research – Flanders, VIB, Stazione Zoologica Anton Dohrn, UNIMIB, ANR (projects “PHYTBACK/ANR-2010-1709-01,” POSEIDON/ANR-09-BLAN-0348, PROMETHEUS/ANR-09-PCS-GENM-217, TARA-GIRUS/ANR-09-PCS-GENM-218, SAMOSA/ANR-13-ADAP-0010, CINNAMON/ANR-17-CE02-0014-01), EU FP7 (MicroB3/No. 287589), ERC Advanced Grant Award (Diatomite: 294823), the LouisD foundation of the Institut de France, a Radcliffe Institute Fellowship from Harvard University to C. B., JSPS/MEXT KAKENHI (26430184, 16H06437, and 16KT0020), The Canon Foundation (203143100025), Gordon and Betty Moore Foundation (award #3790) and the US National Science Foundation (awards OCE#1536989 and OCE#1829831) to MBS, agnès b., the Veolia Environment Foundation, Region Bretagne, World Courier, Illumina, Cap L'Orient, the EDF Foundation EDF Diversiterre, FRB, the Prince Albert II de Monaco Foundation, Etienne Bourgois, the Fonds Français pour l'Environnement Mondial, the TARA schooner and its captain and crew. Tara Oceans would not exist without continuous support from 23 institutes (http://oceans.taraexpeditions.org). This article is contribution number 85 of Tara Oceans. The authors have deposited the data in the following repositories: Sequencing data are archived at ENA (http://www.ebi.ac.uk/ena/) under the accession number PRJEB4352 for the metagenomics data and PRJEB6609 for the metatranscriptomics data (Carradec et al.,); environmental data are available at PANGAEA (https://www.pangaea.de/).Publisher
American Geophysical Union (AGU)Journal
Global Biogeochemical CyclesAdditional Links
https://ieeexplore.ieee.org/document/8621363/ae974a485f413a2113503eed53cd6c53
10.1029/2018GB006022