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dc.contributor.authorAlonso-Sáez, Laura
dc.contributor.authorMoran, Xose Anxelu G.
dc.contributor.authorClokie, Martha RJ
dc.date.accessioned2018-09-03T13:23:09Z
dc.date.available2018-09-03T13:23:09Z
dc.date.issued2018-06-05
dc.identifier.citationAlonso-Sáez L, Morán XAG, Clokie MR (2018) Low activity of lytic pelagiphages in coastal marine waters. The ISME Journal 12: 2100–2102. Available: http://dx.doi.org/10.1038/s41396-018-0185-y.
dc.identifier.issn1751-7362
dc.identifier.issn1751-7370
dc.identifier.doi10.1038/s41396-018-0185-y
dc.identifier.urihttp://hdl.handle.net/10754/628430
dc.description.abstractPhages infect marine bacteria impacting their dynamics, diversity and physiology, but little is known about specific phage–host interactions in situ. We analyzed the joint dynamics in the abundance of phage-related transcripts, as an indicator of viral lytic activity, and their potential hosts using a metatranscriptomic dataset obtained over 2 years in coastal temperate waters of the NE Atlantic. Substantial temporal variability was identified in the expression levels of different phages, likely in response to host availability. Indeed, a significant positive relationship between the abundance of transcripts from some of the most abundant phage types (infecting SAR11, SAR116 and cyanobacteria) and their putative hosts was found. Yet, the ratio of increase in phage transcripts per host cell was significantly lower for pelagiphages than for the HMO-2011 phage, which infects SAR116. Despite the high abundance of pelagiphages in the ocean, they may be less active than other phage types in coastal waters.
dc.description.sponsorshipWe are grateful to the captain and crew of RV ‘José de Rioja’ and to the colleagues from IEO Xixón for their help with RNA samples collection, especially to N. Arandia-Gorostidi and T. Huete-Stauffer. Bioinformatic analyses have been supported by CESGA (Centro de Supercomputación de Galicia) and ALICE HPC (University of Leicester). This work was funded by the Marie Curie European Reintegration Grant FUNDIVERSITY’ (FP7, Grant Agreement 268331) the British Ecological Society and the time-series program RADIALES from the Spanish Institute of Oceanography (IEO). LA-S was supported by the research contracts ‘Juan de la Cierva’ and ‘Ramon y Cajal’ from the Spanish Ministry of Economy and Competitiveness.
dc.publisherSpringer Nature
dc.relation.urlhttps://www.nature.com/articles/s41396-018-0185-y
dc.rightsThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/
dc.titleLow activity of lytic pelagiphages in coastal marine waters
dc.typeArticle
dc.contributor.departmentBiological and Environmental Sciences and Engineering (BESE) Division
dc.contributor.departmentMarine Science Program
dc.contributor.departmentMicrobial oceanography Research Group
dc.contributor.departmentRed Sea Research Center (RSRC)
dc.identifier.journalThe ISME Journal
dc.eprint.versionPublisher's Version/PDF
dc.contributor.institutionCentro Oceanográfico de Gijón/Xixón, IEO, Gijón, Xixón, , , Spain
dc.contributor.institutionAZTI, Marine Research Division, Sukarrieta, , Spain
dc.contributor.institutionDepartment of Infection, Immunity and Inflammation, University of Leicester, Leicester, , United Kingdom
kaust.personMoran, Xose Anxelu G.
refterms.dateFOA2018-09-09T13:26:35Z


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This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
Except where otherwise noted, this item's license is described as This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.