Supplementary Material for: Astrocyte-specific overexpressed gene signatures in response to methamphetamine exposure in vitro
KAUST DepartmentBiological and Environmental Sciences and Engineering (BESE) Division
Permanent link to this recordhttp://hdl.handle.net/10754/624147
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AbstractAbstract Background Astrocyte activation is one of the earliest findings in the brain of methamphetamine (Meth) abusers. Our goal in this study was to identify the characteristics of the astrocytic acute response to the drug, which may be critical in pathogenic outcomes secondary to the use. Methods We developed an integrated analysis of gene expression data to study the acute gene changes caused by the direct exposure to Meth treatment of astrocytes in vitro, and to better understand how astrocytes respond, what are the early molecular markers associated with this response. We examined the literature in search of similar changes in gene signatures that are found in central nervous system disorders. Results We identified overexpressed gene networks represented by genes of an inflammatory and immune nature and that are implicated in neuroactive ligand-receptor interactions. The overexpressed networks are linked to molecules that were highly upregulated in astrocytes by all doses of methamphetamine tested and that could play a role in the central nervous system. The strongest overexpressed signatures were the upregulation of MAP2K5, GPR65, and CXCL5, and the gene networks individually associated with these molecules. Pathway analysis revealed that these networks are involved both in neuroprotection and in neuropathology. We have validated several targets associated to these genes. Conclusions Gene signatures for the astrocytic response to Meth were identified among the upregulated gene pool, using an in vitro system. The identified markers may participate in dysfunctions of the central nervous system but could also provide acute protection to the drug exposure. Further in vivo studies are necessary to establish the role of these gene networks in drug abuse pathogenesis.
CitationBortell, N., Basova, L., Semenova, S., Fox, H., Ravasi, T., & Marcondes, M. (2017). Astrocyte-specific overexpressed gene signatures in response to methamphetamine exposure in vitro. Figshare. https://doi.org/10.6084/m9.figshare.c.3713953
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Bortell N, Basova L, Semenova S, Fox HS, Ravasi T, et al. (2017) Astrocyte-specific overexpressed gene signatures in response to methamphetamine exposure in vitro. Journal of Neuroinflammation 14. Available: http://dx.doi.org/10.1186/s12974-017-0825-6.. DOI: 10.1186/s12974-017-0825-6 HANDLE: 10754/622994