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dc.contributor.authorSlater, Luke
dc.contributor.authorRodriguez-Garcia, Miguel Angel
dc.contributor.authorO’Shea, Keiron
dc.contributor.authorSchofield, Paul N.
dc.contributor.authorGkoutos, Georgios V.
dc.contributor.authorHoehndorf, Robert
dc.date.accessioned2017-01-02T08:10:21Z
dc.date.available2017-01-02T08:10:21Z
dc.date.issued2016-04-20
dc.identifier.citationSlater L, Rodríguez-García MÁ, O’Shea K, Schofield PN, Gkoutos GV, et al. (2016) Experiences with Aber-OWL, an Ontology Repository with OWL EL Reasoning. Ontology Engineering: 81–86. Available: http://dx.doi.org/10.1007/978-3-319-33245-1_8.
dc.identifier.issn0302-9743
dc.identifier.issn1611-3349
dc.identifier.doi10.1007/978-3-319-33245-1_8
dc.identifier.urihttp://hdl.handle.net/10754/622142
dc.description.abstractOntologies are widely used in biology and biomedicine for the annotation and integration of data, and hundreds of ontologies have been developed for this purpose. These ontologies also constitute large volumes of formalized domain knowledge, usually expressed in the Web Ontology Language (OWL). Computational access to the knowledge contained within them relies on the use of automated reasoning. We have developed Aber-OWL, an ontology repository that provides OWL EL reasoning to answer queries and verify the consistency of ontologies. Aber-OWL also provides a set of web services which provide ontology-based access to scientific literature in Pubmed and Pubmed Central, SPARQL query expansion to retrieve linked data, and integration with Bio2RDF. Here, we report on our experiences with Aber-OWL and outline a roadmap for future development. Aber-OWL is freely available at http://aber-owl.net.
dc.publisherSpringer Nature
dc.subjectBiomedical ontology
dc.subjectLiterature search
dc.subjectQuery expansion
dc.subjectSemantic indexing
dc.subjectSemantic web
dc.titleExperiences with Aber-OWL, an Ontology Repository with OWL EL Reasoning
dc.typeConference Paper
dc.contributor.departmentBio-Ontology Research Group (BORG)
dc.contributor.departmentComputational Bioscience Research Center (CBRC)
dc.contributor.departmentComputer Science Program
dc.contributor.departmentComputer, Electrical and Mathematical Sciences and Engineering (CEMSE) Division
dc.identifier.journalLecture Notes in Computer Science
dc.conference.date2015-10-09 to 2015-10-10
dc.conference.name12th International Experiences and Directions Workshop on OWL, OWLED 2015, co-located with International Semantic Web Conference, ISWC 2015
dc.conference.locationBethlehem, PA, USA
dc.contributor.institutionAberystwyth University, Aberystwyth, Wales, SY23 3DB, United Kingdom
dc.contributor.institutionUniversity of Cambridge, Downing Street, Cambridge, CB2 3EG, United Kingdom
kaust.personSlater, Luke
kaust.personRodriguez-Garcia, Miguel Angel
kaust.personO’Shea, Keiron
kaust.personHoehndorf, Robert
dc.date.published-online2016-04-20
dc.date.published-print2016


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