• Login
    View Item 
    •   Home
    • Research
    • Articles
    • View Item
    •   Home
    • Research
    • Articles
    • View Item
    JavaScript is disabled for your browser. Some features of this site may not work without it.

    Browse

    All of KAUSTCommunitiesTitleAuthorsKAUST AuthorsIssue DateSubmit DateSubjectsThis CollectionTitleAuthorsKAUST AuthorsIssue DateSubmit DateSubjects

    My Account

    Login

    Quick Links

    Open Access PolicyORCID LibguidePlumX LibguideSubmit an Item

    Statistics

    Display statistics

    Regal phylogeography: Range-wide survey of the marine angelfish Pygoplites diacanthus reveals evolutionary partitions between the Red Sea, Indian Ocean, and Pacific Ocean

    • CSV
    • RefMan
    • EndNote
    • BibTex
    • RefWorks
    Thumbnail
    Name:
    1-s2.0-S1055790316300392-main.pdf
    Size:
    2.141Mb
    Format:
    PDF
    Description:
    Accepted Manuscript
    Download
    Thumbnail
    Name:
    1-s2.0-S1055790316300392-fx1.jpg
    Size:
    32.09Kb
    Format:
    JPEG image
    Description:
    Graphical abstract
    Image viewer
    Download
    Type
    Article
    Authors
    Coleman, Richard R. cc
    Eble, Jeffrey A.
    DiBattista, Joseph cc
    Rocha, Luiz A.
    Randall, John E.
    Berumen, Michael L. cc
    Bowen, Brian W.
    KAUST Department
    Red Sea Research Center (RSRC)
    Biological and Environmental Sciences and Engineering (BESE) Division
    Date
    2016-04-08
    Permanent link to this record
    http://hdl.handle.net/10754/605017
    
    Metadata
    Show full item record
    Abstract
    The regal angelfish (Pygoplites diacanthus; family Pomacanthidae) occupies reefs from the Red Sea to the central Pacific, with an Indian Ocean/Rea Sea color morph distinct from a Pacific Ocean morph. To assess population differentiation and evaluate the possibility of cryptic evolutionary partitions in this monotypic genus, we surveyed mtDNA cytochrome b and two nuclear introns (S7 and RAG2) in 547 individuals from 15 locations. Phylogeographic analyses revealed four mtDNA lineages (d = 0.006 – 0.015) corresponding to the Pacific Ocean, the Red Sea, and two admixed lineages in the Indian Ocean, a pattern consistent with known biogeographical barriers. Christmas Island in the eastern Indian Ocean had both Indian and Pacific lineages. Both S7 and RAG2 showed strong population-level differentiation between the Red Sea, Indian Ocean, and Pacific Ocean (ΦST = 0.066 – 0.512). The only consistent population sub-structure within these three regions was at the Society Islands (French Polynesia), where surrounding oceanographic conditions may reinforce isolation. Coalescence analyses indicate the Pacific (1.7 Ma) as the oldest extant lineage followed by the Red Sea lineage (1.4 Ma). Results from a median-joining network suggest radiations of two lineages from the Red Sea that currently occupy the Indian Ocean (0.7 – 0.9 Ma). Persistence of a Red Sea lineage through Pleistocene glacial cycles suggests a long-term refuge in this region. The affiliation of Pacific and Red Sea populations, apparent in cytochrome b and S7 (but equivocal in RAG2) raises the hypthosis that the Indian Ocean was recolonized from the Red Sea, possibly more than once. Assessing the genetic architecture of this widespread monotypic genus reveals cryptic evolutionary diversity that merits subspecific recognition.
    Citation
    Regal phylogeography: Range-wide survey of the marine angelfish Pygoplites diacanthus reveals evolutionary partitions between the Red Sea, Indian Ocean, and Pacific Ocean 2016 Molecular Phylogenetics and Evolution
    Sponsors
    This project was supported by the Seaver Institute (to BWB), the National Science Foundation (NSF) OCE-0929031 (BWB), NOAA National Marine Sanctuaries Program MOA grant No. 2005-008/66882 (R.J. Toonen), King Abdullah University of Science and Technology (KAUST) Office of Competitive Research Funds under Award no. CRG-1-2012-BER-002 and baseline research funds to MLB, as well as National Geographic Society Grant 9024-11 to JDD. RRC was supported by NSF grant DGE-1329626 and the Dr. Nancy Foster Scholarship program under Award no. NA15NOS4290067. This paper is funded in part by a grant/cooperative agreement from the National Oceanic and Atmospheric Administration, Project R/CR-14, which is sponsored by the University of Hawaii Sea Grant College Program, SOEST, under Institutional Grant No. NA05OAR4171048 (to BWB) from NOAA Office of Sea Grant, Department of Commerce. Fieldwork at Christmas Island was supported by National Geographic Grant 8208-07 (M.T. Craig). We thank Eric Mason and the crew at Dream Divers in Saudi Arabia, Nicolas Prévot at Dolphin Divers and the crew of the M/V Deli in Djibouti, the KAUST Coastal and Marine Resources Core Lab, the KAUST Reef Ecology Lab, Amr Gusti, the Administration of the British Indian Ocean Territory and Chagos Conservation Trust, as well as the University of Milano-Bicocca Marine Research and High Education Centre in Magoodhoo, the Ministry of Fisheries and Agriculture, Republic of Maldives, and the community of Maghoodhoo, Faafu Atoll. For assistance in collection efforts we thank Alfonso Alexander, Senifa Annandale, Howard Choat, Pat Colin, Lori Colin, Joshua Copus, Matthew Craig, Michelle Gaither, Brian Greene, Jean-Paul Hobbs, Garrett Johnson, Stephen Karl, Randall Kosaki, Cassie Lyons, David Pence, Mark Priest, Joshua Reece, D. Ross Robertson, Tane Sinclair-Taylor, Robert Thorne, and Robert Whitton. We thank the HIMB EPSCoR core facility and the University of Hawai‘i’s Advanced Studies in Genomics, Proteomics, and Bioinformatics facility for their assistance with DNA sequencing. We also thank Michelle Gaither, Brent Snelgrove, Robert Toonen, and members of the ToBo lab for their assistance, logistical support, and feedback throughout this project. Thanks to Tane Sinclair-Taylor for the graphical abstract images. Thanks to editor Giacomo Bernardi and one anonymous reviewer for critique and suggestions that improved the paper. The views expressed herein are those of the authors and do not necessarily reflect the views of NOAA or any of its subagencies. This is contribution #1653 from the Hawai‘i Institute of Marine Biology, #9592 from the School of Ocean and Earth Science and Technology, and #JC-06-03 from University of Hawai‘i Sea Grant Program.
    Publisher
    Elsevier BV
    Journal
    Molecular Phylogenetics and Evolution
    ISSN
    10557903
    DOI
    10.1016/j.ympev.2016.04.005
    PubMed ID
    27068838
    Additional Links
    http://linkinghub.elsevier.com/retrieve/pii/S1055790316300392
    ae974a485f413a2113503eed53cd6c53
    10.1016/j.ympev.2016.04.005
    Scopus Count
    Collections
    Articles; Biological and Environmental Sciences and Engineering (BESE) Division; Red Sea Research Center (RSRC); Reef Genomics, part of the Global Ocean Genome Project

    entitlement

    Related articles

    • Phylogeography of the reef fish Cephalopholis argus (Epinephelidae) indicates Pleistocene isolation across the Indo-Pacific Barrier with contemporary overlap in The Coral Triangle.
    • Authors: Gaither MR, Bowen BW, Bordenave TR, Rocha LA, Newman SJ, Gomez JA, van Herwerden L, Craig MT
    • Issue date: 2011 Jul 1
    • Phylogeny of deepwater snappers (Genus Etelis) reveals a cryptic species pair in the Indo-Pacific and Pleistocene invasion of the Atlantic.
    • Authors: Andrews KR, Williams AJ, Fernandez-Silva I, Newman SJ, Copus JM, Wakefield CB, Randall JE, Bowen BW
    • Issue date: 2016 Jul
    • Phylogeography of two closely related Indo-Pacific butterflyfishes reveals divergent evolutionary histories and discordant results from mtDNA and microsatellites.
    • Authors: DiBattista JD, Rocha LA, Craig MT, Feldheim KA, Bowen BW
    • Issue date: 2012 Sep-Oct
    • Phylogeography of Ophioblennius: the role of ocean currents and geography in reef fish evolution.
    • Authors: Muss A, Robertson DR, Stepien CA, Wirtz P, Bowen BW
    • Issue date: 2001 Mar
    • Blacktip reef sharks, Carcharhinus melanopterus, have high genetic structure and varying demographic histories in their Indo-Pacific range.
    • Authors: Vignaud TM, Mourier J, Maynard JA, Leblois R, Spaet J, Clua E, Neglia V, Planes S
    • Issue date: 2014 Nov
    DSpace software copyright © 2002-2019  DuraSpace
    Quick Guide | Contact Us | Send Feedback
    Open Repository is a service hosted by 
    Atmire NV
     

    Export search results

    The export option will allow you to export the current search results of the entered query to a file. Different formats are available for download. To export the items, click on the button corresponding with the preferred download format.

    By default, clicking on the export buttons will result in a download of the allowed maximum amount of items. For anonymous users the allowed maximum amount is 50 search results.

    To select a subset of the search results, click "Selective Export" button and make a selection of the items you want to export. The amount of items that can be exported at once is similarly restricted as the full export.

    After making a selection, click one of the export format buttons. The amount of items that will be exported is indicated in the bubble next to export format.