KAUST DepartmentBiological and Environmental Sciences and Engineering (BESE) Division
Computational Bioscience Research Center (CBRC)
Computer, Electrical and Mathematical Sciences and Engineering (CEMSE) Division
Online Publication Date2015-10-25
Print Publication Date2016-02
Permanent link to this recordhttp://hdl.handle.net/10754/581690
MetadataShow full item record
AbstractEnvironmental studies are primarily done by culturing isolated microorganisms or by amplifying and sequencing conserved genes. Difficulties understanding the complexity of large numbers of various microorganisms in an environment led to the development of techniques to enrich specific microorganisms for upstream analysis, ultimately leading to single-cell isolation and analyses. We discuss the significance of single-cell technologies in omics studies with focus on metagenomics and metatranscriptomics. We propose that by reducing sample heterogeneity using single-cell genomics, metaomic studies can be simplified.
CitationSingle-cell technologies in environmental omics 2015 Gene
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- Issue date: 2014 Oct 20
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- Authors: Carvalhais LC, Dennis PG, Tyson GW, Schenk PM
- Issue date: 2012 Nov
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