Exploring Shared-Memory Optimizations for an Unstructured Mesh CFD Application on Modern Parallel Systems

Abstract

In this work, we revisit the 1999 Gordon Bell Prize winning PETSc-FUN3D aerodynamics code, extending it with highly-tuned shared-memory parallelization and detailed performance analysis on modern highly parallel architectures. An unstructured-grid implicit flow solver, which forms the backbone of computational aerodynamics, poses particular challenges due to its large irregular working sets, unstructured memory accesses, and variable/limited amount of parallelism. This code, based on a domain decomposition approach, exposes tradeoffs between the number of threads assigned to each MPI-rank sub domain, and the total number of domains. By applying several algorithm- and architecture-aware optimization techniques for unstructured grids, we show a 6.9X speed-up in performance on a single-node Intel® XeonTM1 E5 2690 v2 processor relative to the out-of-the-box compilation. Our scaling studies on TACC Stampede supercomputer show that our optimizations continue to provide performance benefits over baseline implementation as we scale up to 256 nodes.