Nsite, NsiteH and NsiteM Computer Tools for Studying Tran-scription Regulatory Elements
Microsoft Word 2007
Microsoft Word 2007
KAUST DepartmentComputational Bioscience Research Center (CBRC)
Computer Science Program
Computer, Electrical and Mathematical Sciences and Engineering (CEMSE) Division
Online Publication Date2015-07-02
Print Publication Date2015-11-01
Permanent link to this recordhttp://hdl.handle.net/10754/559100
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AbstractSummary: Gene transcription is mostly conducted through interactions of various transcription factors and their binding sites on DNA (regulatory elements, REs). Today, we are still far from understanding the real regulatory content of promoter regions. Computer methods for identification of REs remain a widely used tool for studying and understanding transcriptional regulation mechanisms. The Nsite, NsiteH and NsiteM programs perform searches for statistically significant (non-random) motifs of known human, animal and plant one-box and composite REs in a single genomic sequence, in a pair of aligned homologous sequences and in a set of functionally related sequences, respectively.
CitationNsite, NsiteH and NsiteM Computer Tools for Studying Tran-scription Regulatory Elements 2015:btv404 Bioinformatics
PublisherOxford University Press (OUP)
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