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    Genomic analysis of the causative agents of coccidiosis in domestic chickens

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    Type
    Article
    Authors
    Reid, Adam J.
    Blake, Damer P.
    Ansari, Hifzur Rahman cc
    Billington, Karen
    Browne, Hilary P.
    Bryant, Josephine
    Dunn, Matt
    Hung, Stacy S.
    Kawahara, Fumiya
    Miranda-Saavedra, Diego
    Malas, Tareq Majed Yasin cc
    Mourier, Tobias
    Naghra, Hardeep
    Nair, Mridul
    Otto, Thomas D.
    Rawlings, Neil D.
    Rivailler, Pierre
    Sanchez-Flores, Alejandro
    Sanders, Mandy
    Subramaniam, Chandra
    Tay, Yea-Ling
    Woo, Yong
    Wu, Xikun
    Barrell, Bart
    Dear, Paul H.
    Doerig, Christian
    Gruber, Arthur
    Ivens, Alasdair C.
    Parkinson, John
    Rajandream, Marie-Adèle
    Shirley, Martin W.
    Wan, Kiew-Lian
    Berriman, Matthew
    Tomley, Fiona M.
    Pain, Arnab cc
    KAUST Department
    Biological and Environmental Sciences and Engineering (BESE) Division
    Bioscience Program
    Computational Bioscience Research Center (CBRC)
    Computer Science Program
    Pathogen Genomics Laboratory
    Date
    2014-07-11
    Online Publication Date
    2014-07-11
    Print Publication Date
    2014-10
    Permanent link to this record
    http://hdl.handle.net/10754/346998
    
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    Abstract
    Global production of chickens has trebled in the past two decades and they are now the most important source of dietary animal protein worldwide. Chickens are subject to many infectious diseases that reduce their performance and productivity. Coccidiosis, caused by apicomplexan protozoa of the genus Eimeria, is one of the most important poultry diseases. Understanding the biology of Eimeria parasites underpins development of new drugs and vaccines needed to improve global food security. We have produced annotated genome sequences of all seven species of Eimeria that infect domestic chickens, which reveal the full extent of previously described repeat-rich and repeat-poor regions and show that these parasites possess the most repeat-rich proteomes ever described. Furthermore, while no other apicomplexan has been found to possess retrotransposons, Eimeria is home to a family of chromoviruses. Analysis of Eimeria genes involved in basic biology and host-parasite interaction highlights adaptations to a relatively simple developmental life cycle and a complex array of co-expressed surface proteins involved in host cell binding.
    Citation
    Genomic analysis of the causative agents of coccidiosis in domestic chickens 2014, 24 (10):1676 Genome Research
    Publisher
    Cold Spring Harbor Laboratory
    Journal
    Genome Research
    DOI
    10.1101/gr.168955.113
    PubMed ID
    25015382
    PubMed Central ID
    PMC4199364
    Additional Links
    http://genome.cshlp.org/lookup/doi/10.1101/gr.168955.113
    ae974a485f413a2113503eed53cd6c53
    10.1101/gr.168955.113
    Scopus Count
    Collections
    Articles; Biological and Environmental Sciences and Engineering (BESE) Division; Bioscience Program; Computer Science Program; Computational Bioscience Research Center (CBRC)

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