Supplementary Material for: Hologenome analysis of two marine sponges with different microbiomes

Handle URI:
http://hdl.handle.net/10754/624127
Title:
Supplementary Material for: Hologenome analysis of two marine sponges with different microbiomes
Authors:
Ryu, Tae Woo; Seridi, Loqmane; Moitinho-Silva, Lucas; Oates, Matthew; Liew, Yi; Mavromatis, Charalampos Harris ( 0000-0002-7327-231X ) ; Wang, Xiaolei; Haywood, Annika; Lafi, Feras; Kupresanin, Marija; Sougrat, Rachid; Alzahrani, Majed A.; Giles, Emily; Ghosheh, Yanal ( 0000-0002-3733-2098 ) ; Schunter, Celia Marei ( 0000-0003-3620-2731 ) ; Baumgarten, Sebastian ( 0000-0003-2646-7699 ) ; Berumen, Michael; Gao, Xin ( 0000-0002-7108-3574 ) ; Aranda, Manuel ( 0000-0001-6673-016X ) ; Foret, Sylvain; Gough, Julian; Voolstra, Christian; Hentschel, Ute; Ravasi, Timothy ( 0000-0002-9950-465X )
Abstract:
Abstract Background Sponges (Porifera) harbor distinct microbial consortia within their mesohyl interior. We herein analysed the hologenomes of Stylissa carteri and Xestospongia testudinaria, which notably differ in their microbiome content. Results Our analysis revealed that S. carteri has an expanded repertoire of immunological domains, specifically Scavenger Receptor Cysteine-Rich (SRCR)-like domains, compared to X. testudinaria. On the microbial side, metatranscriptome analyses revealed an overrepresentation of potential symbiosis-related domains in X. testudinaria. Conclusions Our findings provide genomic insights into the molecular mechanisms underlying host-symbiont coevolution and may serve as a roadmap for future hologenome analyses.
KAUST Department:
Biological and Environmental Sciences and Engineering (BESE) Division; Computer Science Program; Bioscience Program; Imaging and Characterization Core Lab; Computational Bioscience Research Center (CBRC); Marine Science Program; Computer, Electrical and Mathematical Sciences and Engineering (CEMSE) Division
Citation:
Taewoo Ryu, Loqmane Seridi, Moitinho-Silva, L., Oates, M., Liew, Y., Mavromatis, C., … Ravasi. (2016). Hologenome analysis of two marine sponges with different microbiomes. Figshare. https://doi.org/10.6084/m9.figshare.c.3597026
Publisher:
Figshare
Issue Date:
2016
DOI:
10.6084/m9.figshare.c.3597026
Type:
Dataset
Is Supplement To:
Hologenome analysis of two marine sponges with different microbiomes 2016, 17 (1) BMC Genomics; DOI:10.1186/s12864-016-2501-0; HANDLE:http://hdl.handle.net/10754/600476
Appears in Collections:
Bioscience Program; Marine Science Program; Advanced Nanofabrication, Imaging and Characterization Core Lab; Computer Science Program; Computational Bioscience Research Center (CBRC); Datasets; Biological and Environmental Sciences and Engineering (BESE) Division; Computer, Electrical and Mathematical Sciences and Engineering (CEMSE) Division

Full metadata record

DC FieldValue Language
dc.contributor.authorRyu, Tae Wooen
dc.contributor.authorSeridi, Loqmaneen
dc.contributor.authorMoitinho-Silva, Lucasen
dc.contributor.authorOates, Matthewen
dc.contributor.authorLiew, Yien
dc.contributor.authorMavromatis, Charalampos Harrisen
dc.contributor.authorWang, Xiaoleien
dc.contributor.authorHaywood, Annikaen
dc.contributor.authorLafi, Ferasen
dc.contributor.authorKupresanin, Marijaen
dc.contributor.authorSougrat, Rachiden
dc.contributor.authorAlzahrani, Majed A.en
dc.contributor.authorGiles, Emilyen
dc.contributor.authorGhosheh, Yanalen
dc.contributor.authorSchunter, Celia Mareien
dc.contributor.authorBaumgarten, Sebastianen
dc.contributor.authorBerumen, Michaelen
dc.contributor.authorGao, Xinen
dc.contributor.authorAranda, Manuelen
dc.contributor.authorForet, Sylvainen
dc.contributor.authorGough, Julianen
dc.contributor.authorVoolstra, Christianen
dc.contributor.authorHentschel, Uteen
dc.contributor.authorRavasi, Timothyen
dc.date.accessioned2017-06-06T07:44:31Z-
dc.date.available2017-06-06T07:44:31Z-
dc.date.created2016-12-14en
dc.date.issued2016en
dc.identifier.citationTaewoo Ryu, Loqmane Seridi, Moitinho-Silva, L., Oates, M., Liew, Y., Mavromatis, C., … Ravasi. (2016). Hologenome analysis of two marine sponges with different microbiomes. Figshare. https://doi.org/10.6084/m9.figshare.c.3597026en
dc.identifier.doi10.6084/m9.figshare.c.3597026en
dc.identifier.urihttp://hdl.handle.net/10754/624127-
dc.description.abstractAbstract Background Sponges (Porifera) harbor distinct microbial consortia within their mesohyl interior. We herein analysed the hologenomes of Stylissa carteri and Xestospongia testudinaria, which notably differ in their microbiome content. Results Our analysis revealed that S. carteri has an expanded repertoire of immunological domains, specifically Scavenger Receptor Cysteine-Rich (SRCR)-like domains, compared to X. testudinaria. On the microbial side, metatranscriptome analyses revealed an overrepresentation of potential symbiosis-related domains in X. testudinaria. Conclusions Our findings provide genomic insights into the molecular mechanisms underlying host-symbiont coevolution and may serve as a roadmap for future hologenome analyses.en
dc.publisherFigshareen
dc.rightsCC BYen
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/en
dc.subjectMicrobiologyen
dc.subjectCell Biologyen
dc.subjectGeneticsen
dc.subjectMolecular Biologyen
dc.subjectEcologyen
dc.subjectInorganic Chemistryen
dc.titleSupplementary Material for: Hologenome analysis of two marine sponges with different microbiomesen
dc.typeDataseten
dc.contributor.departmentBiological and Environmental Sciences and Engineering (BESE) Divisionen
dc.contributor.departmentComputer Science Programen
dc.contributor.departmentBioscience Programen
dc.contributor.departmentImaging and Characterization Core Laben
dc.contributor.departmentComputational Bioscience Research Center (CBRC)en
dc.contributor.departmentMarine Science Programen
dc.contributor.departmentComputer, Electrical and Mathematical Sciences and Engineering (CEMSE) Divisionen
kaust.authorRyu, Tae Wooen
kaust.authorSeridi, Loqmaneen
kaust.authorMavromatis, Charalampos Harrisen
kaust.authorWang, Xiaoleien
kaust.authorHaywood, Annikaen
kaust.authorSougrat, Rachiden
kaust.authorAlzahrani, Majed A.en
kaust.authorGiles, Emilyen
kaust.authorGhosheh, Yanalen
kaust.authorSchunter, Celia Mareien
kaust.authorBaumgarten, Sebastianen
kaust.authorGao, Xinen
kaust.authorAranda, Manuelen
kaust.authorRavasi, Timothyen
dc.type.resourceCollectionen
dc.relation.isSupplementToHologenome analysis of two marine sponges with different microbiomes 2016, 17 (1) BMC Genomicsen
dc.relation.isSupplementToDOI:10.1186/s12864-016-2501-0en
dc.relation.isSupplementToHANDLE:http://hdl.handle.net/10754/600476en
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