Evolutionary insights into scleractinian corals using comparative genomic hybridizations.

Handle URI:
http://hdl.handle.net/10754/323533
Title:
Evolutionary insights into scleractinian corals using comparative genomic hybridizations.
Authors:
Aranda, Manuel ( 0000-0001-6673-016X ) ; DeSalvo, Michael K; Bayer, Till; Medina, Monica; Voolstra, Christian R. ( 0000-0003-4555-3795 )
Abstract:
Coral reefs belong to the most ecologically and economically important ecosystems on our planet. Yet, they are under steady decline worldwide due to rising sea surface temperatures, disease, and pollution. Understanding the molecular impact of these stressors on different coral species is imperative in order to predict how coral populations will respond to this continued disturbance. The use of molecular tools such as microarrays has provided deep insight into the molecular stress response of corals. Here, we have performed comparative genomic hybridizations (CGH) with different coral species to an Acropora palmata microarray platform containing 13,546 cDNA clones in order to identify potentially rapidly evolving genes and to determine the suitability of existing microarray platforms for use in gene expression studies (via heterologous hybridization).
KAUST Department:
Red Sea Research Center (RSRC)
Citation:
Aranda M, DeSalvo MK, Bayer T, Medina M, Voolstra CR (2012) Evolutionary insights into scleractinian corals using comparative genomic hybridizations. BMC Genomics 13: 501. doi:10.1186/1471-2164-13-501.
Publisher:
Springer Nature
Journal:
BMC Genomics
Issue Date:
21-Sep-2012
DOI:
10.1186/1471-2164-13-501
PubMed ID:
22994626
PubMed Central ID:
PMC3469353
Type:
Article
ISSN:
1471-2164
Additional Links:
http://www.biomedcentral.com/1471-2164/13/501; http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3469353/
Appears in Collections:
Articles; Red Sea Research Center (RSRC)

Full metadata record

DC FieldValue Language
dc.contributor.authorAranda, Manuelen
dc.contributor.authorDeSalvo, Michael Ken
dc.contributor.authorBayer, Tillen
dc.contributor.authorMedina, Monicaen
dc.contributor.authorVoolstra, Christian R.en
dc.date.accessioned2014-07-21T13:03:55Z-
dc.date.available2014-07-21T13:03:55Z-
dc.date.issued2012-09-21en
dc.identifier.citationAranda M, DeSalvo MK, Bayer T, Medina M, Voolstra CR (2012) Evolutionary insights into scleractinian corals using comparative genomic hybridizations. BMC Genomics 13: 501. doi:10.1186/1471-2164-13-501.en
dc.identifier.issn1471-2164en
dc.identifier.pmid22994626en
dc.identifier.doi10.1186/1471-2164-13-501en
dc.identifier.urihttp://hdl.handle.net/10754/323533en
dc.description.abstractCoral reefs belong to the most ecologically and economically important ecosystems on our planet. Yet, they are under steady decline worldwide due to rising sea surface temperatures, disease, and pollution. Understanding the molecular impact of these stressors on different coral species is imperative in order to predict how coral populations will respond to this continued disturbance. The use of molecular tools such as microarrays has provided deep insight into the molecular stress response of corals. Here, we have performed comparative genomic hybridizations (CGH) with different coral species to an Acropora palmata microarray platform containing 13,546 cDNA clones in order to identify potentially rapidly evolving genes and to determine the suitability of existing microarray platforms for use in gene expression studies (via heterologous hybridization).en
dc.language.isoenen
dc.publisherSpringer Natureen
dc.relation.urlhttp://www.biomedcentral.com/1471-2164/13/501en
dc.relation.urlhttp://www.ncbi.nlm.nih.gov/pmc/articles/PMC3469353/en
dc.rightsArchived with thanks to BMC genomicsen
dc.subject.meshAnimalsen
dc.subject.meshAnthozoaen
dc.subject.meshBiological Evolutionen
dc.subject.meshComparative Genomic Hybridizationen
dc.subject.meshCoral Reefsen
dc.subject.meshOligonucleotide Array Sequence Analysisen
dc.subject.meshAnimalsen
dc.subject.meshAnthozoaen
dc.subject.meshBiological Evolutionen
dc.subject.meshComparative Genomic Hybridizationen
dc.subject.meshCoral Reefsen
dc.subject.meshOligonucleotide Array Sequence Analysisen
dc.titleEvolutionary insights into scleractinian corals using comparative genomic hybridizations.en
dc.typeArticleen
dc.contributor.departmentRed Sea Research Center (RSRC)en
dc.identifier.journalBMC Genomicsen
dc.identifier.pmcidPMC3469353en
dc.eprint.versionPublisher's Version/PDFen
dc.contributor.institutionDepartment of Anesthesia, UCSF School of Medicine, Mission Bay Campus, 600 16th St, Box 2200, San Francisco, CA 94158, United Statesen
dc.contributor.institutionSchool of Natural Sciences, University of California Merced, 5200 North Lake Road, Merced, CA 95343, United Statesen
dc.contributor.affiliationKing Abdullah University of Science and Technology (KAUST)en
kaust.authorAranda, Manuelen
kaust.authorBayer, Tillen
kaust.authorVoolstra, Christian R.en

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